Genomic characterization and linkage mapping of the apple allergen genes Mal d 2 (thaumatin-like protein) and Mal d 4 (profilin).
Identifieur interne : 000411 ( Main/Exploration ); précédent : 000410; suivant : 000412Genomic characterization and linkage mapping of the apple allergen genes Mal d 2 (thaumatin-like protein) and Mal d 4 (profilin).
Auteurs : Z S Gao [Pays-Bas] ; W E Van De Weg ; J G Schaart ; G Van Arkel ; H. Breiteneder ; K. Hoffmann-Sommergruber ; L J W J. GilissenSource :
- TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik [ 0040-5752 ] ; 2005.
Descripteurs français
- KwdFr :
- Allergènes (génétique), Amorces ADN (MeSH), Analyse de séquence d'ADN (MeSH), Cartographie chromosomique (MeSH), Données de séquences moléculaires (MeSH), Glycoprotéines (génétique), Gènes dupliqués (génétique), Génome végétal (MeSH), Malus (génétique), Profilines (génétique), Protéines végétales (génétique), Sélection (méthodes), Séquence d'acides aminés (MeSH), Séquence nucléotidique (MeSH).
- MESH :
English descriptors
- KwdEn :
- Allergens (genetics), Amino Acid Sequence (MeSH), Base Sequence (MeSH), Breeding (methods), Chromosome Mapping (MeSH), DNA Primers (MeSH), Genes, Duplicate (genetics), Genome, Plant (MeSH), Glycoproteins (genetics), Malus (genetics), Molecular Sequence Data (MeSH), Plant Proteins (genetics), Profilins (genetics), Sequence Analysis, DNA (MeSH).
- MESH :
- chemical , genetics : Allergens, Glycoproteins, Plant Proteins, Profilins.
- genetics : Genes, Duplicate, Malus.
- methods : Breeding.
- Amino Acid Sequence, Base Sequence, Chromosome Mapping, DNA Primers, Genome, Plant, Molecular Sequence Data, Sequence Analysis, DNA.
Abstract
Four classes of apple allergens (Mal d 1, -2, -3 and -4) have been reported. By using PCR cloning and sequencing approaches, we obtained genomic sequences of Mal d 2 (thaumatin-like protein) and Mal d 4 (profilin) from the cvs Prima and Fiesta, the two parents of a European reference mapping population. Two copies of the Mal d 2 gene (Mal d 2.01 A and Mal d 2.01 B) were identified, which primarily differed in the length of a single intron (378 or 380 nt) and in one amino acid in the signal peptide. Both Mal d 2.01 A and Mal d 2.01 B were mapped at identical position on linkage group 9. Genomic characterization of four Mal d 4 genes (Mal d 4.01 A and B, Mal d 4.02 A and Mal d 4.03 A) revealed their complete gDNA sequences which varied among genes in length from 862 to 2,017 nt. They all contained three exons of conserved length: 123, 138, and 135 nt. Mal d 4.01 appeared to be duplicated in two copies and located on linkage group 9. Mal d 4.02 A and Mal d 4.03 A were single copy genes located on linkage group 2 and 8, respectively.
DOI: 10.1007/s00122-005-0034-z
PubMed: 16151798
Affiliations:
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Box 16, 6700 Wageningen, The Netherlands.</nlm:affiliation><country xml:lang="fr">Pays-Bas</country><wicri:regionArea>Allergy Consortium Wageningen, Wageningen University and Research Centre, P.O. Box 16, 6700 Wageningen</wicri:regionArea><wicri:noRegion>6700 Wageningen</wicri:noRegion></affiliation></author><author><name sortKey="Weg, W E Van De" sort="Weg, W E Van De" uniqKey="Weg W" first="W E Van De" last="Weg">W E Van De Weg</name></author><author><name sortKey="Schaart, J G" sort="Schaart, J G" uniqKey="Schaart J" first="J G" last="Schaart">J G Schaart</name></author><author><name sortKey="Arkel, G Van" sort="Arkel, G Van" uniqKey="Arkel G" first="G Van" last="Arkel">G Van Arkel</name></author><author><name sortKey="Breiteneder, H" sort="Breiteneder, H" uniqKey="Breiteneder H" first="H" last="Breiteneder">H. Breiteneder</name></author><author><name sortKey="Hoffmann Sommergruber, K" sort="Hoffmann Sommergruber, K" uniqKey="Hoffmann Sommergruber K" first="K" last="Hoffmann-Sommergruber">K. Hoffmann-Sommergruber</name></author><author><name sortKey="Gilissen, L J W J" sort="Gilissen, L J W J" uniqKey="Gilissen L" first="L J W J" last="Gilissen">L J W J. Gilissen</name></author></analytic><series><title level="j">TAG. Theoretical and applied genetics. 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By using PCR cloning and sequencing approaches, we obtained genomic sequences of Mal d 2 (thaumatin-like protein) and Mal d 4 (profilin) from the cvs Prima and Fiesta, the two parents of a European reference mapping population. Two copies of the Mal d 2 gene (Mal d 2.01 A and Mal d 2.01 B) were identified, which primarily differed in the length of a single intron (378 or 380 nt) and in one amino acid in the signal peptide. Both Mal d 2.01 A and Mal d 2.01 B were mapped at identical position on linkage group 9. Genomic characterization of four Mal d 4 genes (Mal d 4.01 A and B, Mal d 4.02 A and Mal d 4.03 A) revealed their complete gDNA sequences which varied among genes in length from 862 to 2,017 nt. They all contained three exons of conserved length: 123, 138, and 135 nt. Mal d 4.01 appeared to be duplicated in two copies and located on linkage group 9. Mal d 4.02 A and Mal d 4.03 A were single copy genes located on linkage group 2 and 8, respectively.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">16151798</PMID><DateCompleted><Year>2006</Year><Month>06</Month><Day>05</Day></DateCompleted><DateRevised><Year>2018</Year><Month>11</Month><Day>13</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Print">0040-5752</ISSN><JournalIssue CitedMedium="Print"><Volume>111</Volume><Issue>6</Issue><PubDate><Year>2005</Year><Month>Oct</Month></PubDate></JournalIssue><Title>TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik</Title><ISOAbbreviation>Theor Appl Genet</ISOAbbreviation></Journal><ArticleTitle>Genomic characterization and linkage mapping of the apple allergen genes Mal d 2 (thaumatin-like protein) and Mal d 4 (profilin).</ArticleTitle><Pagination><MedlinePgn>1087-97</MedlinePgn></Pagination><Abstract><AbstractText>Four classes of apple allergens (Mal d 1, -2, -3 and -4) have been reported. By using PCR cloning and sequencing approaches, we obtained genomic sequences of Mal d 2 (thaumatin-like protein) and Mal d 4 (profilin) from the cvs Prima and Fiesta, the two parents of a European reference mapping population. Two copies of the Mal d 2 gene (Mal d 2.01 A and Mal d 2.01 B) were identified, which primarily differed in the length of a single intron (378 or 380 nt) and in one amino acid in the signal peptide. Both Mal d 2.01 A and Mal d 2.01 B were mapped at identical position on linkage group 9. Genomic characterization of four Mal d 4 genes (Mal d 4.01 A and B, Mal d 4.02 A and Mal d 4.03 A) revealed their complete gDNA sequences which varied among genes in length from 862 to 2,017 nt. They all contained three exons of conserved length: 123, 138, and 135 nt. Mal d 4.01 appeared to be duplicated in two copies and located on linkage group 9. Mal d 4.02 A and Mal d 4.03 A were single copy genes located on linkage group 2 and 8, respectively.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Gao</LastName><ForeName>Z S</ForeName><Initials>ZS</Initials><AffiliationInfo><Affiliation>Allergy Consortium Wageningen, Wageningen University and Research Centre, P.O. 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Breiteneder</name><name sortKey="Gilissen, L J W J" sort="Gilissen, L J W J" uniqKey="Gilissen L" first="L J W J" last="Gilissen">L J W J. Gilissen</name><name sortKey="Hoffmann Sommergruber, K" sort="Hoffmann Sommergruber, K" uniqKey="Hoffmann Sommergruber K" first="K" last="Hoffmann-Sommergruber">K. Hoffmann-Sommergruber</name><name sortKey="Schaart, J G" sort="Schaart, J G" uniqKey="Schaart J" first="J G" last="Schaart">J G Schaart</name><name sortKey="Weg, W E Van De" sort="Weg, W E Van De" uniqKey="Weg W" first="W E Van De" last="Weg">W E Van De Weg</name></noCountry><country name="Pays-Bas"><noRegion><name sortKey="Gao, Z S" sort="Gao, Z S" uniqKey="Gao Z" first="Z S" last="Gao">Z S Gao</name></noRegion></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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